Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Gm45167-201ENSMUST00000208007 322 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Nedd8P29595 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.57□□□□□ -0.4
Nedd8P29595 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.56□□□□□ -0.4
Nedd8P29595 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Gm12895-201ENSMUST00000122214 226 ntBASIC12.56□□□□□ -0.4
Nedd8P29595 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.56□□□□□ -0.4
Nedd8P29595 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nedd8P29595 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nedd8P29595 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nedd8P29595 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.55□□□□□ -0.4
Nedd8P29595 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nedd8P29595 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nedd8P29595 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nedd8P29595 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Nedd8P29595 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.55□□□□□ -0.4
Nedd8P29595 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Gm5479-201ENSMUST00000160578 435 ntBASIC12.55□□□□□ -0.4
Nedd8P29595 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Gm6089-201ENSMUST00000197666 938 ntBASIC12.55□□□□□ -0.4
Nedd8P29595 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.55□□□□□ -0.4
Nedd8P29595 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nedd8P29595 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nedd8P29595 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms