Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.34□□□□□ -0.43
Cd40P27512 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.34□□□□□ -0.43
Cd40P27512 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Cd40P27512 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.34□□□□□ -0.43
Cd40P27512 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.34□□□□□ -0.43
Cd40P27512 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.34□□□□□ -0.43
Cd40P27512 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cd40P27512 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cd40P27512 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40P27512 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Gm12859-201ENSMUST00000117834 427 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Gm15376-201ENSMUST00000122258 783 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.33□□□□□ -0.44
Cd40P27512 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Cd40P27512 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.33□□□□□ -0.44
Cd40P27512 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.33□□□□□ -0.44
Cd40P27512 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cd40P27512 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40P27512 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cd40P27512 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.33□□□□□ -0.44
Cd40P27512 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.32□□□□□ -0.44
Cd40P27512 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.32□□□□□ -0.44
Cd40P27512 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.32□□□□□ -0.44
Cd40P27512 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.32□□□□□ -0.44
Cd40P27512 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.32□□□□□ -0.44
Cd40P27512 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cd40P27512 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cd40P27512 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cd40P27512 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.31□□□□□ -0.44
Cd40P27512 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cd40P27512 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cd40P27512 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms