Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.01□□□□□ -0.17
Nfkb1P25799 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Gm8652-201ENSMUST00000181363 964 ntBASIC14.01□□□□□ -0.17
Nfkb1P25799 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Gm44397-201ENSMUST00000195950 113 ntBASIC14.01□□□□□ -0.17
Nfkb1P25799 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.01□□□□□ -0.17
Nfkb1P25799 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.01□□□□□ -0.17
Nfkb1P25799 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
Nfkb1P25799 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nfkb1P25799 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nfkb1P25799 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nfkb1P25799 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14□□□□□ -0.17
Nfkb1P25799 Gm24447-201ENSMUST00000083977 338 ntBASIC14□□□□□ -0.17
Nfkb1P25799 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Nfkb1P25799 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nfkb1P25799 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nfkb1P25799 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nfkb1P25799 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nfkb1P25799 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.99□□□□□ -0.17
Nfkb1P25799 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nfkb1P25799 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms