Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm3P21107 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.27■□□□□ 0.04
Tpm3P21107 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm3P21107 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm3P21107 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.27■□□□□ 0.04
Tpm3P21107 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.27■□□□□ 0.04
Tpm3P21107 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Tpm3P21107 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm3P21107 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm3P21107 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tpm3P21107 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm3P21107 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tpm3P21107 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm3P21107 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm3P21107 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm3P21107 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tpm3P21107 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.27■□□□□ 0.03
Tpm3P21107 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpm3P21107 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpm3P21107 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tpm3P21107 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tpm3P21107 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Tpm3P21107 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Tpm3P21107 Gm24589-201ENSMUST00000116692 94 ntBASIC15.26■□□□□ 0.03
Tpm3P21107 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.26■□□□□ 0.03
Tpm3P21107 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.26■□□□□ 0.03
Tpm3P21107 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Gm27300-201ENSMUST00000184085 97 ntBASIC15.26■□□□□ 0.03
Tpm3P21107 Gm27335-201ENSMUST00000184758 97 ntBASIC15.26■□□□□ 0.03
Tpm3P21107 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.26■□□□□ 0.03
Tpm3P21107 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.26■□□□□ 0.03
Tpm3P21107 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.26■□□□□ 0.03
Tpm3P21107 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tpm3P21107 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.25■□□□□ 0.03
Tpm3P21107 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tpm3P21107 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.25■□□□□ 0.03
Tpm3P21107 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.25■□□□□ 0.03
Tpm3P21107 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.25■□□□□ 0.03
Tpm3P21107 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.25■□□□□ 0.03
Tpm3P21107 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.25■□□□□ 0.03
Tpm3P21107 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.25■□□□□ 0.03
Tpm3P21107 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tpm3P21107 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.25■□□□□ 0.03
Tpm3P21107 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tpm3P21107 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Tpm3P21107 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.25■□□□□ 0.03
Tpm3P21107 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tpm3P21107 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tpm3P21107 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tpm3P21107 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Tpm3P21107 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tpm3P21107 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tpm3P21107 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms