Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.03□□□□□ -0.16
Rb1P13405 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.03□□□□□ -0.16
Rb1P13405 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.03□□□□□ -0.16
Rb1P13405 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.03□□□□□ -0.16
Rb1P13405 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.03□□□□□ -0.16
Rb1P13405 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rb1P13405 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rb1P13405 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rb1P13405 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Rb1P13405 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rb1P13405 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Rb1P13405 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rb1P13405 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rb1P13405 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.02□□□□□ -0.17
Rb1P13405 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Gm6916-202ENSMUST00000205523 195 ntBASIC14.02□□□□□ -0.17
Rb1P13405 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rb1P13405 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rb1P13405 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Rb1P13405 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Rb1P13405 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.02□□□□□ -0.17
Rb1P13405 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rb1P13405 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rb1P13405 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rb1P13405 Gm15460-201ENSMUST00000118147 391 ntBASIC14.01□□□□□ -0.17
Rb1P13405 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.01□□□□□ -0.17
Rb1P13405 Mir1938-201ENSMUST00000158746 100 ntBASIC14.01□□□□□ -0.17
Rb1P13405 Gm27701-201ENSMUST00000184498 110 ntBASIC14.01□□□□□ -0.17
Rb1P13405 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.01□□□□□ -0.17
Rb1P13405 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.01□□□□□ -0.17
Rb1P13405 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.01□□□□□ -0.17
Rb1P13405 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.01□□□□□ -0.17
Rb1P13405 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rb1P13405 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
Rb1P13405 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rb1P13405 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rb1P13405 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rb1P13405 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rb1P13405 Gm27196-201ENSMUST00000184787 2582 ntBASIC14□□□□□ -0.17
Rb1P13405 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rb1P13405 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rb1P13405 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms