Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.87□□□□□ -0.51
PtcraP0C6B2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.87□□□□□ -0.51
PtcraP0C6B2 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.87□□□□□ -0.51
PtcraP0C6B2 Gm19220-201ENSMUST00000222682 803 ntBASIC11.87□□□□□ -0.51
PtcraP0C6B2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.87□□□□□ -0.51
PtcraP0C6B2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
PtcraP0C6B2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm11524-201ENSMUST00000119349 807 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm19078-201ENSMUST00000206311 727 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm7730-201ENSMUST00000212486 454 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm5161-201ENSMUST00000075243 853 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.86□□□□□ -0.51
PtcraP0C6B2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
PtcraP0C6B2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PtcraP0C6B2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms