Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxa4P06798 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm12928-201ENSMUST00000117115 573 ntBASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm15806-201ENSMUST00000120696 955 ntBASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.4□□□□□ -0.26
Hoxa4P06798 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxa4P06798 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.4□□□□□ -0.26
Hoxa4P06798 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.4□□□□□ -0.26
Hoxa4P06798 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxa4P06798 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Hoxa4P06798 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.39□□□□□ -0.27
Hoxa4P06798 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.39□□□□□ -0.27
Hoxa4P06798 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Gm18473-201ENSMUST00000220543 868 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 Gm26315-201ENSMUST00000083890 321 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxa4P06798 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.39□□□□□ -0.27
Hoxa4P06798 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxa4P06798 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa4P06798 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms