Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06323 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06323 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
P06323 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P06323 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.05□□□□□ -0.64
P06323 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
P06323 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.05□□□□□ -0.64
P06323 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.05□□□□□ -0.64
P06323 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.05□□□□□ -0.64
P06323 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.05□□□□□ -0.64
P06323 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.05□□□□□ -0.64
P06323 Gm18766-201ENSMUST00000189811 808 ntBASIC11.05□□□□□ -0.64
P06323 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.05□□□□□ -0.64
P06323 Gm44335-201ENSMUST00000196879 141 ntBASIC11.05□□□□□ -0.64
P06323 Gm44297-201ENSMUST00000198304 141 ntBASIC11.05□□□□□ -0.64
P06323 Gm44346-201ENSMUST00000198851 141 ntBASIC11.05□□□□□ -0.64
P06323 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.05□□□□□ -0.64
P06323 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.05□□□□□ -0.64
P06323 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P06323 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P06323 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P06323 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P06323 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06323 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.04□□□□□ -0.64
P06323 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P06323 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P06323 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.04□□□□□ -0.64
P06323 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
P06323 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
P06323 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P06323 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P06323 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Gm4995-201ENSMUST00000117247 432 ntBASIC11.04□□□□□ -0.64
P06323 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.04□□□□□ -0.64
P06323 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.04□□□□□ -0.64
P06323 Gm37714-201ENSMUST00000194742 342 ntBASIC11.04□□□□□ -0.64
P06323 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.04□□□□□ -0.64
P06323 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Gm2213-201ENSMUST00000197485 688 ntBASIC11.04□□□□□ -0.64
P06323 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.04□□□□□ -0.64
P06323 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.04□□□□□ -0.64
P06323 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
P06323 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.04□□□□□ -0.64
P06323 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P06323 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.04□□□□□ -0.64
P06323 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P06323 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms