Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.98□□□□□ -0.49
P04224 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.98□□□□□ -0.49
P04224 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
P04224 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Gm13597-201ENSMUST00000121239 375 ntBASIC11.98□□□□□ -0.49
P04224 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Gm45098-201ENSMUST00000207179 657 ntBASIC11.98□□□□□ -0.49
P04224 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.98□□□□□ -0.49
P04224 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.98□□□□□ -0.49
P04224 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P04224 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.98□□□□□ -0.49
P04224 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P04224 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
P04224 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
P04224 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.98□□□□□ -0.49
P04224 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.97□□□□□ -0.49
P04224 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.97□□□□□ -0.49
P04224 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.97□□□□□ -0.49
P04224 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P04224 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
P04224 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
P04224 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.97□□□□□ -0.49
P04224 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Gm16198-201ENSMUST00000118766 670 ntBASIC11.97□□□□□ -0.49
P04224 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Mir5126-201ENSMUST00000175513 77 ntBASIC11.97□□□□□ -0.49
P04224 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.97□□□□□ -0.49
P04224 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
P04224 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
P04224 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.97□□□□□ -0.49
P04224 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
P04224 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.97□□□□□ -0.49
P04224 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P04224 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P04224 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.96□□□□□ -0.49
P04224 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
P04224 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P04224 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P04224 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.96□□□□□ -0.49
P04224 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.96□□□□□ -0.49
P04224 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
P04224 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P04224 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.96□□□□□ -0.49
P04224 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P04224 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.96□□□□□ -0.49
P04224 Gm18195-201ENSMUST00000207604 706 ntBASIC11.96□□□□□ -0.49
P04224 Thap2-203ENSMUST00000218989 527 ntBASIC11.96□□□□□ -0.49
P04224 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.96□□□□□ -0.49
P04224 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
P04224 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms