Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.4□□□□□ -0.58
CfdP03953 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CfdP03953 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.4□□□□□ -0.59
CfdP03953 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CfdP03953 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CfdP03953 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CfdP03953 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.4□□□□□ -0.59
CfdP03953 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.4□□□□□ -0.59
CfdP03953 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.4□□□□□ -0.59
CfdP03953 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CfdP03953 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
CfdP03953 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.39□□□□□ -0.59
CfdP03953 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CfdP03953 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
CfdP03953 Gm6973-201ENSMUST00000117080 721 ntBASIC11.39□□□□□ -0.59
CfdP03953 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.39□□□□□ -0.59
CfdP03953 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.39□□□□□ -0.59
CfdP03953 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.39□□□□□ -0.59
CfdP03953 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.39□□□□□ -0.59
CfdP03953 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CfdP03953 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CfdP03953 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.38□□□□□ -0.59
CfdP03953 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
CfdP03953 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.38□□□□□ -0.59
CfdP03953 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.38□□□□□ -0.59
CfdP03953 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Gm6443-201ENSMUST00000203599 874 ntBASIC11.38□□□□□ -0.59
CfdP03953 Gm18027-201ENSMUST00000218947 619 ntBASIC11.38□□□□□ -0.59
CfdP03953 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CfdP03953 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.38□□□□□ -0.59
CfdP03953 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
CfdP03953 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.38□□□□□ -0.59
CfdP03953 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.38□□□□□ -0.59
CfdP03953 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CfdP03953 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.38□□□□□ -0.59
CfdP03953 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.38□□□□□ -0.59
CfdP03953 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CfdP03953 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
CfdP03953 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
CfdP03953 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CfdP03953 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
CfdP03953 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.37□□□□□ -0.59
CfdP03953 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CfdP03953 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
CfdP03953 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
CfdP03953 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.37□□□□□ -0.59
CfdP03953 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
CfdP03953 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms