Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gm11618-201ENSMUST00000117946 267 ntBASIC16.58■□□□□ 0.24
Cops6O88545 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gm19184-201ENSMUST00000196798 928 ntBASIC16.58■□□□□ 0.24
Cops6O88545 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.58■□□□□ 0.24
Cops6O88545 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.58■□□□□ 0.24
Cops6O88545 Gm9823-201ENSMUST00000051212 327 ntBASIC16.58■□□□□ 0.24
Cops6O88545 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cops6O88545 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cops6O88545 Gm10268-201ENSMUST00000085340 555 ntBASIC16.58■□□□□ 0.24
Cops6O88545 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.58■□□□□ 0.24
Cops6O88545 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cops6O88545 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Cops6O88545 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cops6O88545 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.58■□□□□ 0.24
Cops6O88545 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cops6O88545 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.57■□□□□ 0.24
Cops6O88545 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cops6O88545 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.57■□□□□ 0.24
Cops6O88545 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.57■□□□□ 0.24
Cops6O88545 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.57■□□□□ 0.24
Cops6O88545 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Gm16372-201ENSMUST00000073088 450 ntBASIC16.57■□□□□ 0.24
Cops6O88545 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cops6O88545 Olfr582-201ENSMUST00000098212 960 ntBASIC16.57■□□□□ 0.24
Cops6O88545 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cops6O88545 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cops6O88545 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cops6O88545 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.56■□□□□ 0.24
Cops6O88545 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.56■□□□□ 0.24
Cops6O88545 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cops6O88545 Gm22018-201ENSMUST00000104357 131 ntBASIC16.56■□□□□ 0.24
Cops6O88545 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.56■□□□□ 0.24
Cops6O88545 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.56■□□□□ 0.24
Cops6O88545 Gm26927-201ENSMUST00000182385 965 ntBASIC16.56■□□□□ 0.24
Cops6O88545 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.56■□□□□ 0.24
Cops6O88545 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.56■□□□□ 0.24
Cops6O88545 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.56■□□□□ 0.24
Cops6O88545 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Gm10146-201ENSMUST00000072739 309 ntBASIC16.56■□□□□ 0.24
Cops6O88545 Snora73a-201ENSMUST00000082453 205 ntBASIC16.56■□□□□ 0.24
Cops6O88545 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cops6O88545 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Cops6O88545 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops6O88545 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.55■□□□□ 0.24
Cops6O88545 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cops6O88545 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cops6O88545 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms