Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Vti1bO88384 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vti1bO88384 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.04□□□□□ -0.32
Vti1bO88384 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Gm13616-201ENSMUST00000120600 222 ntBASIC13.03□□□□□ -0.32
Vti1bO88384 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.03□□□□□ -0.32
Vti1bO88384 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.03□□□□□ -0.32
Vti1bO88384 Gm28630-201ENSMUST00000187806 498 ntBASIC13.03□□□□□ -0.32
Vti1bO88384 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Gm45453-201ENSMUST00000211758 853 ntBASIC13.03□□□□□ -0.32
Vti1bO88384 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.03□□□□□ -0.32
Vti1bO88384 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.03□□□□□ -0.32
Vti1bO88384 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vti1bO88384 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vti1bO88384 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.03□□□□□ -0.32
Vti1bO88384 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vti1bO88384 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vti1bO88384 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vti1bO88384 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.32
Vti1bO88384 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vti1bO88384 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.02□□□□□ -0.33
Vti1bO88384 Gm11434-201ENSMUST00000122379 629 ntBASIC13.02□□□□□ -0.33
Vti1bO88384 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.02□□□□□ -0.33
Vti1bO88384 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vti1bO88384 Gm22175-201ENSMUST00000175007 78 ntBASIC13.02□□□□□ -0.33
Vti1bO88384 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vti1bO88384 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 AA619741-201ENSMUST00000195095 646 ntBASIC13.02□□□□□ -0.33
Vti1bO88384 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.02□□□□□ -0.33
Vti1bO88384 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.02□□□□□ -0.33
Vti1bO88384 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.02□□□□□ -0.33
Vti1bO88384 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vti1bO88384 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.02□□□□□ -0.33
Vti1bO88384 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.02□□□□□ -0.33
Vti1bO88384 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vti1bO88384 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vti1bO88384 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vti1bO88384 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms