Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.13□□□□□ -0.47
Col5a1O88207 Gm14017-201ENSMUST00000121934 386 ntBASIC12.13□□□□□ -0.47
Col5a1O88207 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Col5a1O88207 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Col5a1O88207 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col5a1O88207 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col5a1O88207 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 AC122335.2-201ENSMUST00000213901 6181 ntBASIC12.12□□□□□ -0.47
Col5a1O88207 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Col5a1O88207 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Col5a1O88207 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Col5a1O88207 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.12□□□□□ -0.47
Col5a1O88207 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.12□□□□□ -0.47
Col5a1O88207 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.12□□□□□ -0.47
Col5a1O88207 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col5a1O88207 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Col5a1O88207 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col5a1O88207 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.11□□□□□ -0.47
Col5a1O88207 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.11□□□□□ -0.47
Col5a1O88207 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col5a1O88207 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Col5a1O88207 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm6447-201ENSMUST00000118905 835 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Gm14277-201ENSMUST00000121195 360 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Gm11978-201ENSMUST00000122315 466 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm7809-201ENSMUST00000153199 742 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm42997-202ENSMUST00000200321 985 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.11□□□□□ -0.47
Col5a1O88207 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.11□□□□□ -0.47
Col5a1O88207 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col5a1O88207 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.11□□□□□ -0.47
Col5a1O88207 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col5a1O88207 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col5a1O88207 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col5a1O88207 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col5a1O88207 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms