Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ubr1O70481 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.35■□□□□ 0.37
Ubr1O70481 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.35■□□□□ 0.37
Ubr1O70481 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ubr1O70481 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.35■□□□□ 0.37
Ubr1O70481 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.35■□□□□ 0.37
Ubr1O70481 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ubr1O70481 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ubr1O70481 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Ubr1O70481 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.34■□□□□ 0.37
Ubr1O70481 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ubr1O70481 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.34■□□□□ 0.37
Ubr1O70481 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.34■□□□□ 0.37
Ubr1O70481 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ubr1O70481 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr1O70481 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr1O70481 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr1O70481 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ubr1O70481 Gm23270-201ENSMUST00000104055 131 ntBASIC17.33■□□□□ 0.37
Ubr1O70481 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.33■□□□□ 0.37
Ubr1O70481 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.33■□□□□ 0.37
Ubr1O70481 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.33■□□□□ 0.37
Ubr1O70481 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.33■□□□□ 0.37
Ubr1O70481 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.33■□□□□ 0.37
Ubr1O70481 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.33■□□□□ 0.37
Ubr1O70481 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr1O70481 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.33■□□□□ 0.37
Ubr1O70481 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Ubr1O70481 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr1O70481 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.33■□□□□ 0.37
Ubr1O70481 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ubr1O70481 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ubr1O70481 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.33■□□□□ 0.36
Ubr1O70481 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ubr1O70481 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ubr1O70481 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Gm24830-201ENSMUST00000102024 166 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ubr1O70481 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.33■□□□□ 0.36
Ubr1O70481 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Ubr1O70481 Gm25890-201ENSMUST00000177643 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Gm22614-201ENSMUST00000178300 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Mir7221-201ENSMUST00000184009 72 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ubr1O70481 Gm22042-201ENSMUST00000082989 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Gm26232-201ENSMUST00000083360 166 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Gm24136-201ENSMUST00000083374 165 ntBASIC17.33■□□□□ 0.36
Ubr1O70481 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms