Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.37□□□□□ -0.43
Rnf13O54965 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf13O54965 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf13O54965 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf13O54965 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf13O54965 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf13O54965 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf13O54965 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.37□□□□□ -0.43
Rnf13O54965 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf13O54965 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rnf13O54965 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf13O54965 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Rnf13O54965 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.36□□□□□ -0.43
Rnf13O54965 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.36□□□□□ -0.43
Rnf13O54965 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.36□□□□□ -0.43
Rnf13O54965 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf13O54965 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.36□□□□□ -0.43
Rnf13O54965 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf13O54965 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.36□□□□□ -0.43
Rnf13O54965 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.36□□□□□ -0.43
Rnf13O54965 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.36□□□□□ -0.43
Rnf13O54965 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.36□□□□□ -0.43
Rnf13O54965 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf13O54965 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rnf13O54965 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.35□□□□□ -0.43
Rnf13O54965 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.35□□□□□ -0.43
Rnf13O54965 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf13O54965 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf13O54965 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf13O54965 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.35□□□□□ -0.43
Rnf13O54965 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.35□□□□□ -0.43
Rnf13O54965 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.35□□□□□ -0.43
Rnf13O54965 Gm6443-201ENSMUST00000203599 874 ntBASIC12.35□□□□□ -0.43
Rnf13O54965 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Gm10175-201ENSMUST00000086013 645 ntBASIC12.35□□□□□ -0.43
Rnf13O54965 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rnf13O54965 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rnf13O54965 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf13O54965 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf13O54965 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms