Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm9727-201ENSMUST00000161387 555 ntBASIC12.4□□□□□ -0.42
Matn3O35701 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.4□□□□□ -0.42
Matn3O35701 Gm27702-201ENSMUST00000184512 56 ntBASIC12.4□□□□□ -0.42
Matn3O35701 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.4□□□□□ -0.42
Matn3O35701 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.4□□□□□ -0.42
Matn3O35701 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.4□□□□□ -0.42
Matn3O35701 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Matn3O35701 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.4□□□□□ -0.42
Matn3O35701 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Matn3O35701 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.4□□□□□ -0.42
Matn3O35701 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Matn3O35701 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Matn3O35701 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Matn3O35701 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Matn3O35701 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Matn3O35701 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Matn3O35701 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Matn3O35701 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Matn3O35701 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.39□□□□□ -0.43
Matn3O35701 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.39□□□□□ -0.43
Matn3O35701 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Gm27628-201ENSMUST00000184911 107 ntBASIC12.39□□□□□ -0.43
Matn3O35701 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Matn3O35701 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Matn3O35701 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.39□□□□□ -0.43
Matn3O35701 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Matn3O35701 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Matn3O35701 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Matn3O35701 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.38□□□□□ -0.43
Matn3O35701 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Gm14494-201ENSMUST00000118786 435 ntBASIC12.38□□□□□ -0.43
Matn3O35701 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Matn3O35701 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.38□□□□□ -0.43
Matn3O35701 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Matn3O35701 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.38□□□□□ -0.43
Matn3O35701 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms