Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.28■□□□□ 0.36
Col15a1O35206 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col15a1O35206 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col15a1O35206 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm25668-201ENSMUST00000157700 129 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Mir433-201ENSMUST00000093564 124 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col15a1O35206 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Snord83b-201ENSMUST00000104546 94 ntBASIC17.27■□□□□ 0.35
Col15a1O35206 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.27■□□□□ 0.35
Col15a1O35206 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.27■□□□□ 0.35
Col15a1O35206 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Col15a1O35206 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Col15a1O35206 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col15a1O35206 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Col15a1O35206 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col15a1O35206 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.26■□□□□ 0.35
Col15a1O35206 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.26■□□□□ 0.35
Col15a1O35206 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.26■□□□□ 0.35
Col15a1O35206 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col15a1O35206 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Col15a1O35206 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Col15a1O35206 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col15a1O35206 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Col15a1O35206 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.25■□□□□ 0.35
Col15a1O35206 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col15a1O35206 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.25■□□□□ 0.35
Col15a1O35206 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.25■□□□□ 0.35
Col15a1O35206 Gm8738-201ENSMUST00000172606 329 ntBASIC17.25■□□□□ 0.35
Col15a1O35206 Mir5132-201ENSMUST00000175166 71 ntBASIC17.25■□□□□ 0.35
Col15a1O35206 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.25■□□□□ 0.35
Col15a1O35206 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col15a1O35206 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.25■□□□□ 0.35
Col15a1O35206 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Col15a1O35206 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col15a1O35206 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms