Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.84□□□□□ -0.35
Cx3cl1O35188 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.84□□□□□ -0.35
Cx3cl1O35188 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.84□□□□□ -0.35
Cx3cl1O35188 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.84□□□□□ -0.35
Cx3cl1O35188 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.84□□□□□ -0.35
Cx3cl1O35188 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.84□□□□□ -0.35
Cx3cl1O35188 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cx3cl1O35188 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Cx3cl1O35188 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Gm12859-201ENSMUST00000117834 427 ntBASIC12.83□□□□□ -0.36
Cx3cl1O35188 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Gm5279-201ENSMUST00000199575 745 ntBASIC12.83□□□□□ -0.36
Cx3cl1O35188 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.83□□□□□ -0.36
Cx3cl1O35188 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cx3cl1O35188 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.82□□□□□ -0.36
Cx3cl1O35188 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cx3cl1O35188 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms