Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Polr1aO35134 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC20.58■□□□□ 0.88
Polr1aO35134 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC20.58■□□□□ 0.88
Polr1aO35134 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Gm8862-201ENSMUST00000198379 1346 ntBASIC20.58■□□□□ 0.88
Polr1aO35134 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Polr1aO35134 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC20.58■□□□□ 0.88
Polr1aO35134 Gm43273-201ENSMUST00000199649 2594 ntBASIC20.58■□□□□ 0.88
Polr1aO35134 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Polr1aO35134 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Polr1aO35134 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Polr1aO35134 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Polr1aO35134 AC123857.2-201ENSMUST00000225756 1582 ntBASIC20.57■□□□□ 0.88
Polr1aO35134 Gm24990-201ENSMUST00000157406 323 ntBASIC20.57■□□□□ 0.88
Polr1aO35134 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC20.57■□□□□ 0.88
Polr1aO35134 Gm26956-201ENSMUST00000182176 986 ntBASIC20.57■□□□□ 0.88
Polr1aO35134 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC20.57■□□□□ 0.88
Polr1aO35134 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC20.57■□□□□ 0.88
Polr1aO35134 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC20.57■□□□□ 0.88
Polr1aO35134 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Polr1aO35134 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC20.57■□□□□ 0.88
Polr1aO35134 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Polr1aO35134 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Polr1aO35134 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC20.56■□□□□ 0.88
Polr1aO35134 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC20.56■□□□□ 0.88
Polr1aO35134 Gm13097-201ENSMUST00000210722 397 ntBASIC20.56■□□□□ 0.88
Polr1aO35134 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Polr1aO35134 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Polr1aO35134 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Polr1aO35134 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC20.56■□□□□ 0.88
Polr1aO35134 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Polr1aO35134 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC20.56■□□□□ 0.88
Polr1aO35134 Gm7857-201ENSMUST00000117957 358 ntBASIC20.56■□□□□ 0.88
Polr1aO35134 Gm14017-201ENSMUST00000121934 386 ntBASIC20.56■□□□□ 0.88
Polr1aO35134 Gm9061-201ENSMUST00000182707 1006 ntBASIC20.56■□□□□ 0.88
Polr1aO35134 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Polr1aO35134 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC20.55■□□□□ 0.88
Polr1aO35134 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Gm16505-201ENSMUST00000179981 232 ntBASIC20.55■□□□□ 0.88
Polr1aO35134 Gm2546-201ENSMUST00000182630 991 ntBASIC20.55■□□□□ 0.88
Polr1aO35134 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Mir7221-201ENSMUST00000184009 72 ntBASIC20.55■□□□□ 0.88
Polr1aO35134 Gm3287-205ENSMUST00000228893 1332 ntBASIC20.55■□□□□ 0.88
Polr1aO35134 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Polr1aO35134 Gm10782-202ENSMUST00000223775 1480 ntBASIC20.55■□□□□ 0.88
Polr1aO35134 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Polr1aO35134 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Polr1aO35134 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Gm10605-202ENSMUST00000183019 3198 ntBASIC20.54■□□□□ 0.88
Polr1aO35134 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Polr1aO35134 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms