Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm38000-201ENSMUST00000192390 1215 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Gm18056-201ENSMUST00000207670 568 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Gm18061-201ENSMUST00000208350 562 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Gm18063-201ENSMUST00000208529 568 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Gm18052-201ENSMUST00000208750 559 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Morn2-202ENSMUST00000227729 656 ntBASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcf11G3X9Z4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Gm10608-202ENSMUST00000213924 676 ntBASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcf11G3X9Z4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Gm44207-201ENSMUST00000204568 1424 ntBASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Gm12749-201ENSMUST00000122138 1159 ntBASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcf11G3X9Z4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms