Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm2213-201ENSMUST00000197485 688 ntBASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Mir698-201ENSMUST00000102164 109 ntBASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pcdh1F7BJK1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pcdh1F7BJK1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Mir1895-201ENSMUST00000122615 79 ntBASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.27□□□□□ -0.45
Pcdh1F7BJK1 Rprl2-201ENSMUST00000157150 290 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms