Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf6F6VAN0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Atf6F6VAN0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf6F6VAN0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf6F6VAN0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atf6F6VAN0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Atf6F6VAN0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Gm12151-201ENSMUST00000121374 290 ntBASIC14.03□□□□□ -0.16
Atf6F6VAN0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Gm27306-201ENSMUST00000183970 107 ntBASIC14.03□□□□□ -0.16
Atf6F6VAN0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.03□□□□□ -0.16
Atf6F6VAN0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Gm44872-201ENSMUST00000207864 420 ntBASIC14.03□□□□□ -0.16
Atf6F6VAN0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atf6F6VAN0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.02□□□□□ -0.16
Atf6F6VAN0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atf6F6VAN0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Atf6F6VAN0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Gm6912-201ENSMUST00000117218 544 ntBASIC14.02□□□□□ -0.17
Atf6F6VAN0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Gm24420-201ENSMUST00000176676 59 ntBASIC14.02□□□□□ -0.17
Atf6F6VAN0 Gm27989-201ENSMUST00000184721 107 ntBASIC14.02□□□□□ -0.17
Atf6F6VAN0 Grk6-205ENSMUST00000224653 2976 ntBASIC14.02□□□□□ -0.17
Atf6F6VAN0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atf6F6VAN0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.01□□□□□ -0.17
Atf6F6VAN0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.01□□□□□ -0.17
Atf6F6VAN0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atf6F6VAN0 Rubie-203ENSMUST00000227803 2430 ntBASIC14.01□□□□□ -0.17
Atf6F6VAN0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6F6VAN0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Atf6F6VAN0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14□□□□□ -0.17
Atf6F6VAN0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14□□□□□ -0.17
Atf6F6VAN0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms