Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.31■□□□□ 0.2
Ube4aE9Q735 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.31■□□□□ 0.2
Ube4aE9Q735 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Gm37008-201ENSMUST00000195712 319 ntBASIC16.31■□□□□ 0.2
Ube4aE9Q735 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.31■□□□□ 0.2
Ube4aE9Q735 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4aE9Q735 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.3■□□□□ 0.2
Ube4aE9Q735 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.3■□□□□ 0.2
Ube4aE9Q735 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Gm9823-201ENSMUST00000051212 327 ntBASIC16.3■□□□□ 0.2
Ube4aE9Q735 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Ube4aE9Q735 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.3■□□□□ 0.2
Ube4aE9Q735 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.29■□□□□ 0.2
Ube4aE9Q735 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Olfr582-201ENSMUST00000098212 960 ntBASIC16.29■□□□□ 0.2
Ube4aE9Q735 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ube4aE9Q735 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms