Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm5356-201ENSMUST00000093326 615 ntBASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb9E9Q5G2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Gm10729-202ENSMUST00000193403 1375 ntBASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Gm5687-201ENSMUST00000118252 640 ntBASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 AC132467.2-202ENSMUST00000227726 559 ntBASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Gm9755-201ENSMUST00000032981 1356 ntBASIC16■□□□□ 0.15
Pcdhb9E9Q5G2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb9E9Q5G2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm13612-201ENSMUST00000119276 390 ntBASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm17794-201ENSMUST00000220252 955 ntBASIC15.98■□□□□ 0.15
Pcdhb9E9Q5G2 Gm18473-201ENSMUST00000220543 868 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms