Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cpsf4lE9Q2N0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gm11524-201ENSMUST00000119349 807 ntBASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gm26464-201ENSMUST00000157094 305 ntBASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gm28631-201ENSMUST00000190740 334 ntBASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cpsf4lE9Q2N0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cpsf4lE9Q2N0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms