Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm18463-201ENSMUST00000207258 474 ntBASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col6a3E9PWQ3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm18460-201ENSMUST00000208088 464 ntBASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm2517-201ENSMUST00000215651 348 ntBASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Gm1821-202ENSMUST00000227415 750 ntBASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.26□□□□□ -0.29
Col6a3E9PWQ3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm14219-201ENSMUST00000120414 288 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm32999-201ENSMUST00000192693 562 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col6a3E9PWQ3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gm45310-201ENSMUST00000210436 275 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 BC037039-201ENSMUST00000192003 2205 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col6a3E9PWQ3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms