Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Hfm1D3Z4R1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Gm5846-201ENSMUST00000193146 1414 ntBASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Gm15889-202ENSMUST00000212669 2443 ntBASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Gm8959-201ENSMUST00000213150 571 ntBASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC18.81■□□□□ 0.6
Hfm1D3Z4R1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Gm23200-201ENSMUST00000104379 132 ntBASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Gm14109-201ENSMUST00000118814 309 ntBASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Gm10702-201ENSMUST00000098929 1268 ntBASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hfm1D3Z4R1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Gm38157-201ENSMUST00000194178 1698 ntBASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 AC135669.1-202ENSMUST00000216742 540 ntBASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hfm1D3Z4R1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm9083-201ENSMUST00000120423 819 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms