Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Birc2-201ENSMUST00000054878 378 ntBASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Gm7461-201ENSMUST00000058918 827 ntBASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Syt7-205ENSMUST00000224135 1557 ntBASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12887B1AVM1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Gm12887B1AVM1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gm10060-201ENSMUST00000212002 111 ntBASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.02□□□□□ -0.65
Gm12887B1AVM1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Mir7071-201ENSMUST00000184847 69 ntBASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Gm12887B1AVM1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms