Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col4a6B1AVK5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Gm12502-201ENSMUST00000120197 444 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Gm44967-201ENSMUST00000207047 631 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col4a6B1AVK5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm23200-201ENSMUST00000104379 132 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm2546-201ENSMUST00000182630 991 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Mir6979-201ENSMUST00000183927 56 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Mir6927-201ENSMUST00000184494 71 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 AU022133-201ENSMUST00000200601 873 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm18212-201ENSMUST00000211678 889 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col4a6B1AVK5 Gm14109-201ENSMUST00000118814 309 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm38092-201ENSMUST00000195600 653 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.72□□□□□ -0.21
Col4a6B1AVK5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms