Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.11□□□□□ -0.47
Gm11127A7VMS2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.11□□□□□ -0.47
Gm11127A7VMS2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm11127A7VMS2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm11127A7VMS2 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.08□□□□□ -0.47
Gm11127A7VMS2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.08□□□□□ -0.47
Gm11127A7VMS2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm11127A7VMS2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm11127A7VMS2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Gm11127A7VMS2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm11127A7VMS2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms