Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.83□□□□□ -0.2
Gm5640A3KG49 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Gm5640A3KG49 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Gm5640A3KG49 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.83□□□□□ -0.2
Gm5640A3KG49 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.83□□□□□ -0.2
Gm5640A3KG49 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm5640A3KG49 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.82□□□□□ -0.2
Gm5640A3KG49 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm5640A3KG49 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.81□□□□□ -0.2
Gm5640A3KG49 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Gm5177-201ENSMUST00000183092 997 ntBASIC13.81□□□□□ -0.2
Gm5640A3KG49 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.81□□□□□ -0.2
Gm5640A3KG49 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Gm7461-201ENSMUST00000058918 827 ntBASIC13.81□□□□□ -0.2
Gm5640A3KG49 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm5640A3KG49 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm5640A3KG49 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms