Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm12218-201ENSMUST00000117666 399 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm13996-201ENSMUST00000118456 430 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm42511-201ENSMUST00000196160 234 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Gm44651-201ENSMUST00000207343 372 ntBASIC10.93□□□□□ -0.66
Chd6A3KFM7 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chd6A3KFM7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm15432-201ENSMUST00000121106 195 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm3793-201ENSMUST00000204973 672 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm25700-201ENSMUST00000177693 110 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm37028-201ENSMUST00000194276 107 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.92□□□□□ -0.66
Chd6A3KFM7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chd6A3KFM7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm13035-201ENSMUST00000117496 342 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm12363-201ENSMUST00000122250 668 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm35960-201ENSMUST00000202712 767 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms