Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm6091-201ENSMUST00000098307 165 ntBASIC14.21□□□□□ -0.13
Scn1aA2APX8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn1aA2APX8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Scn1aA2APX8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn1aA2APX8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn1aA2APX8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn1aA2APX8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn1aA2APX8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm43438-201ENSMUST00000198133 379 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm6447-201ENSMUST00000118905 835 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm27486-201ENSMUST00000184923 80 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.2□□□□□ -0.14
Scn1aA2APX8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn1aA2APX8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Gm11618-201ENSMUST00000117946 267 ntBASIC14.19□□□□□ -0.14
Scn1aA2APX8 Gm27331-201ENSMUST00000183705 60 ntBASIC14.19□□□□□ -0.14
Scn1aA2APX8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.19□□□□□ -0.14
Scn1aA2APX8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.19□□□□□ -0.14
Scn1aA2APX8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scn1aA2APX8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms