Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.34□□□□□ -0.59
Trbv29A0A0G2LB96 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv29A0A0G2LB96 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv29A0A0G2LB96 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trbv29A0A0G2LB96 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv29A0A0G2LB96 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trbv29A0A0G2LB96 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm6916-202ENSMUST00000205523 195 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm18206-201ENSMUST00000207027 926 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm16476-201ENSMUST00000221544 139 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.33□□□□□ -0.6
Trbv29A0A0G2LB96 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Gm29541-201ENSMUST00000191351 678 ntBASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv29A0A0G2LB96 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms