Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm13036-201ENSMUST00000117799 748 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm21362-201ENSMUST00000194272 928 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm45747-201ENSMUST00000212203 999 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav3n-3A0A0G2JEM0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Map1b-203ENSMUST00000223725 2669 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mir8098-201ENSMUST00000184011 137 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm18195-201ENSMUST00000207604 706 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3n-3A0A0G2JEM0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms