Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm5779-201ENSMUST00000218467 910 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Chchd1-203ENSMUST00000224633 557 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav5-4A0A075B652 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav5-4A0A075B652 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gm8410-201ENSMUST00000117225 605 ntBASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Dupd1-202ENSMUST00000224735 548 ntBASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav5-4A0A075B652 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm24543-201ENSMUST00000103867 82 ntBASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm6736-201ENSMUST00000166583 948 ntBASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav5-4A0A075B652 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms