Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav8-1A0A075B641 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Gm27357-201ENSMUST00000183754 135 ntBASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Gm37584-201ENSMUST00000193595 1290 ntBASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Olfr286-202ENSMUST00000205305 969 ntBASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav8-1A0A075B641 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm14859-201ENSMUST00000117752 357 ntBASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav8-1A0A075B641 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms