Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Atp6ap1Q9R1Q9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Mir6977-201ENSMUST00000184960 64 ntBASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm7730-201ENSMUST00000212486 454 ntBASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.37□□□□□ -0.27
Atp6ap1Q9R1Q9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm44855-201ENSMUST00000205725 362 ntBASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Atp6ap1Q9R1Q9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms