Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Prpf40aQ9R1C7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.04■□□□□ -0
Prpf40aQ9R1C7 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.04■□□□□ -0
Prpf40aQ9R1C7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Prpf40aQ9R1C7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Gm15487-201ENSMUST00000122373 465 ntBASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf40aQ9R1C7 Gm37744-201ENSMUST00000194616 1590 ntBASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Gm14719-201ENSMUST00000121891 340 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms