Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sec61a2Q9JLR1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sec61a2Q9JLR1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sec61a2Q9JLR1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Gm44344-201ENSMUST00000200287 129 ntBASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Sec61a2Q9JLR1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Gm33320-201ENSMUST00000192232 530 ntBASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Gm37714-201ENSMUST00000194742 342 ntBASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61a2Q9JLR1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a2Q9JLR1 Gm27989-201ENSMUST00000184721 107 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms