Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccl28Q9JIL2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm22065-201ENSMUST00000103753 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm22066-201ENSMUST00000103761 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24932-201ENSMUST00000103763 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24115-201ENSMUST00000103799 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm22190-201ENSMUST00000103827 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm22191-201ENSMUST00000103831 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24721-201ENSMUST00000103849 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm28018-201ENSMUST00000103869 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm26399-201ENSMUST00000103937 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm25349-201ENSMUST00000177728 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm23616-201ENSMUST00000177797 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm25871-201ENSMUST00000177816 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24752-201ENSMUST00000178240 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24496-201ENSMUST00000178287 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm25649-201ENSMUST00000178476 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm25548-201ENSMUST00000178681 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm23147-201ENSMUST00000178841 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm26095-201ENSMUST00000179270 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm22171-201ENSMUST00000179283 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm23936-201ENSMUST00000179354 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm22619-201ENSMUST00000179516 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm25255-201ENSMUST00000179579 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24755-201ENSMUST00000179691 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm26506-201ENSMUST00000179692 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm25086-201ENSMUST00000179931 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm23243-201ENSMUST00000180047 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24659-201ENSMUST00000180212 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm24169-201ENSMUST00000180244 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm23689-201ENSMUST00000180354 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm27359-201ENSMUST00000184153 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm27785-201ENSMUST00000184268 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm27466-201ENSMUST00000184396 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm27703-201ENSMUST00000184836 110 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ccl28Q9JIL2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccl28Q9JIL2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms