Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm21794-201ENSMUST00000187056 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21880-201ENSMUST00000187275 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21826-201ENSMUST00000187451 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21198-201ENSMUST00000188393 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21749-201ENSMUST00000189343 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21901-201ENSMUST00000189568 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm29424-201ENSMUST00000189716 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm28599-201ENSMUST00000189838 694 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21867-201ENSMUST00000189917 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm29269-201ENSMUST00000190087 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21722-201ENSMUST00000190153 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm28423-201ENSMUST00000190701 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21899-201ENSMUST00000190745 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21910-201ENSMUST00000191163 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21849-201ENSMUST00000191571 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm28678-201ENSMUST00000191593 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm20910-201ENSMUST00000193268 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm21871-201ENSMUST00000194621 696 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.83□□□□□ -0.36
Trim39Q9ESN2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim39Q9ESN2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm22065-201ENSMUST00000103753 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm22066-201ENSMUST00000103761 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24932-201ENSMUST00000103763 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24115-201ENSMUST00000103799 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm22190-201ENSMUST00000103827 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm22191-201ENSMUST00000103831 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24721-201ENSMUST00000103849 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm28018-201ENSMUST00000103869 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm26399-201ENSMUST00000103937 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm25349-201ENSMUST00000177728 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm23616-201ENSMUST00000177797 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm25871-201ENSMUST00000177816 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24752-201ENSMUST00000178240 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24496-201ENSMUST00000178287 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm25649-201ENSMUST00000178476 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm25548-201ENSMUST00000178681 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm23147-201ENSMUST00000178841 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm26095-201ENSMUST00000179270 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm22171-201ENSMUST00000179283 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm23936-201ENSMUST00000179354 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm22619-201ENSMUST00000179516 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm25255-201ENSMUST00000179579 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24755-201ENSMUST00000179691 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm26506-201ENSMUST00000179692 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm25086-201ENSMUST00000179931 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm23243-201ENSMUST00000180047 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24659-201ENSMUST00000180212 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm24169-201ENSMUST00000180244 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm23689-201ENSMUST00000180354 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm27359-201ENSMUST00000184153 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm27785-201ENSMUST00000184268 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm27466-201ENSMUST00000184396 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gm27703-201ENSMUST00000184836 110 ntBASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim39Q9ESN2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim39Q9ESN2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms