Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Gm27839-201ENSMUST00000184242 106 ntBASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 CT009738.1-201ENSMUST00000219031 809 ntBASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube3bQ9ES34 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Gm13829-201ENSMUST00000119600 138 ntBASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.19■□□□□ 0.18
Ube3bQ9ES34 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm24196-201ENSMUST00000179161 110 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm6266-201ENSMUST00000203844 806 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm7561-201ENSMUST00000211203 886 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm8598-201ENSMUST00000221184 836 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube3bQ9ES34 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ube3bQ9ES34 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms