Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Mir5126-201ENSMUST00000175513 77 ntBASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.11□□□□□ -0.31
Ube4bQ9ES00 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ube4bQ9ES00 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Mir5131-201ENSMUST00000175426 93 ntBASIC13.1□□□□□ -0.31
Ube4bQ9ES00 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.1□□□□□ -0.31
Ube4bQ9ES00 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ube4bQ9ES00 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.09□□□□□ -0.31
Ube4bQ9ES00 Olfr286-202ENSMUST00000205305 969 ntBASIC13.09□□□□□ -0.31
Ube4bQ9ES00 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms