Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm45186-201ENSMUST00000206874 478 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-4Q9EQM3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Gm22334-201ENSMUST00000158070 133 ntBASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-4Q9EQM3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm15782-201ENSMUST00000121073 445 ntBASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-4Q9EQM3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms