Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmgn3Q9DCB1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Gm10154-201ENSMUST00000084445 354 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmgn3Q9DCB1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms