Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
RtcAQ9D7H3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RtcAQ9D7H3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RtcAQ9D7H3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Gm12485-201ENSMUST00000119641 291 ntBASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RtcAQ9D7H3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Gm11524-201ENSMUST00000119349 807 ntBASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Gm12091-201ENSMUST00000146791 830 ntBASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Gm45668-201ENSMUST00000211271 493 ntBASIC13.32□□□□□ -0.28
RtcAQ9D7H3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Gm15823-201ENSMUST00000064305 670 ntBASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Gm6180-201ENSMUST00000065243 498 ntBASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RtcAQ9D7H3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm26464-201ENSMUST00000157094 305 ntBASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
RtcAQ9D7H3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms