Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Stag1Q9D3E6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Gm16177-201ENSMUST00000120728 718 ntBASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Mir6420-201ENSMUST00000185032 102 ntBASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Gm42693-201ENSMUST00000196779 631 ntBASIC16.24■□□□□ 0.19
Stag1Q9D3E6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.24■□□□□ 0.19
Stag1Q9D3E6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Stag1Q9D3E6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm8213-201ENSMUST00000118191 441 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm12403-201ENSMUST00000121384 959 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm26315-201ENSMUST00000083890 321 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Stag1Q9D3E6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms