Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm45453-201ENSMUST00000211758 853 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.95□□□□□ -0.34
Upk1aQ9D132 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk1aQ9D132 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.94□□□□□ -0.34
Upk1aQ9D132 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.94□□□□□ -0.34
Upk1aQ9D132 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk1aQ9D132 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Upk1aQ9D132 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Mir698-201ENSMUST00000102164 109 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm4995-201ENSMUST00000117247 432 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Rprl2-201ENSMUST00000157150 290 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm5264-201ENSMUST00000190584 848 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.93□□□□□ -0.34
Upk1aQ9D132 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk1aQ9D132 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk1aQ9D132 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk1aQ9D132 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk1aQ9D132 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upk1aQ9D132 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Upk1aQ9D132 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk1aQ9D132 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms