Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Snf8Q9CZ28 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.07□□□□□ -0.16
Snf8Q9CZ28 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.07□□□□□ -0.16
Snf8Q9CZ28 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Snf8Q9CZ28 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm5566-201ENSMUST00000116118 459 ntBASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm9719-201ENSMUST00000162765 543 ntBASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm9824-201ENSMUST00000178707 561 ntBASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Snf8Q9CZ28 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.05□□□□□ -0.16
Snf8Q9CZ28 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms